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GrainGenes Marker Report: k05364

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Locus	k05364
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	basdn23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 30 ] SNP = C/T SNP structure (UNICODE) = AGTTCGGCAGYTTTGTTGCCA Parent 1 SNP sequence = AGTTCGGCAGCTTTGTTGCCA Parent 2 SNP sequence = AGTTCGGCAGTTTTGTTGCCA SNP = G/A SNP structure (UNICODE) = AAACGATGGARATTAATCGTG Parent 1 SNP sequence = AAACGATGGAGATTAATCGTG Parent 2 SNP sequence = AAACGATGGAAATTAATCGTG SNP = A/T SNP structure (UNICODE) = GATGTAGCAGWTGATCTTACA Parent 1 SNP sequence = GATGTAGCAGATGATCTTACA Parent 2 SNP sequence = GATGTAGCAGTTGATCTTACA SNP structure (UNICODE) = GATGACATTTYACATGTCATT Parent 1 SNP sequence = GATGACATTTCACATGTCATT Parent 2 SNP sequence = GATGACATTTTACATGTCATT SNP = C/A SNP structure (UNICODE) = CCTTGAGTTTMTTGCAAATAA Parent 1 SNP sequence = CCTTGAGTTTCTTGCAAATAA Parent 2 SNP sequence = CCTTGAGTTTATTGCAAATAA SNP = T/C SNP structure (UNICODE) = GATTCACTGGYCCATTCGGAT Parent 1 SNP sequence = GATTCACTGGTCCATTCGGAT Parent 2 SNP sequence = GATTCACTGGCCCATTCGGAT SNP = T/A SNP structure (UNICODE) = CAACAGCTTGWTCAGTGGTGC Parent 1 SNP sequence = CAACAGCTTGTTCAGTGGTGC Parent 2 SNP sequence = CAACAGCTTGATCAGTGGTGC SNP structure (UNICODE) = TTGTGCGGACWTCAACAGCTT Parent 1 SNP sequence = TTGTGCGGACTTCAACAGCTT Parent 2 SNP sequence = TTGTGCGGACATCAACAGCTT
Probe for Locus	basdn23
Locus	k05364
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TGCCTGGGGTTGAAGAATAC Right 5' - CCGCGCTTAAGTGAAAATGT
PCR size	357