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GrainGenes Marker Report: k06138

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Locus	k06138
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 287.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK21N09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = T/G SNP structure (UNICODE) = ATCCATAACTKTTGGCCACCC Parent 1 SNP sequence = ATCCATAACTTTTGGCCACCC Parent 2 SNP sequence = ATCCATAACTGTTGGCCACCC SNP = A/G SNP structure (UNICODE) = CCACTTCCTCRTCCGCATTTG Parent 1 SNP sequence = CCACTTCCTCATCCGCATTTG Parent 2 SNP sequence = CCACTTCCTCGTCCGCATTTG SNP structure (UNICODE) = CTTGCAAGCTRTCGAACTGGC Parent 1 SNP sequence = CTTGCAAGCTATCGAACTGGC Parent 2 SNP sequence = CTTGCAAGCTGTCGAACTGGC
Probe for Locus	BaAK21N09
Locus	k06138
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Putative receptor protein kinase ZmPK1 precursor pir S10930 S-receptor kinase (EC 2.7.1.-) homolog PK1 precursor - maize
Type	PCR
PCR primers	Left 5' - CAAGCAGTCGCATCTCTCAA Right 5' - GCAGATCTTCAGCTGCATCA
Sequence	BJ462089
PCR size	350