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GrainGenes Marker Report: k06366

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Locus	k06366
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 158.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK29I15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = CCGTGCCGACRTGTGCTTGCT Parent 1 SNP sequence = CCGTGCCGACGTGTGCTTGCT Parent 2 SNP sequence = CCGTGCCGACATGTGCTTGCT SNP = C/A SNP structure (UNICODE) = TCCGGTGTGTMCGTGCTGCCC Parent 1 SNP sequence = TCCGGTGTGTCCGTGCTGCCC Parent 2 SNP sequence = TCCGGTGTGTACGTGCTGCCC
Probe for Locus	BaAK29I15
Locus	k06366
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = dehydrin Dhn5 - barley gb AAA32952.1 dehydrin DHN5
Type	PCR
PCR primers	Left 5' - AGCCAATCCTCCACCAGATA Right 5' - CAGGTACCGGGATTTCAAGA
Sequence	M95810
PCR size	366