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GrainGenes Marker Report: k06372

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Locus	k06372
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 144.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK31O05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = GATCGAGGTAKCCGACGGAAT Parent 1 SNP sequence = GATCGAGGTAGCCGACGGAAT Parent 2 SNP sequence = GATCGAGGTATCCGACGGAAT SNP = T/C SNP structure (UNICODE) = ACGCTGTAAAYTGGCTACCGG Parent 1 SNP sequence = ACGCTGTAAATTGGCTACCGG Parent 2 SNP sequence = ACGCTGTAAACTGGCTACCGG
Probe for Locus	BaAK31O05
Locus	k06372
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative glutathione S-transferase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTGCAGATGAAGAAGCATGG Right 5' - GTGAAACCATTGGCAGCTTT
Sequence	BJ546043
PCR size	373