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GrainGenes Marker Report: k06517

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Locus	k06517
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 195
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK39M05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/T SNP structure (UNICODE) = GCTGTGAATGWGTTTCCAGCT Parent 1 SNP sequence = GCTGTGAATGAGTTTCCAGCT Parent 2 SNP sequence = GCTGTGAATGTGTTTCCAGCT SNP = A/G SNP structure (UNICODE) = TCCATCTGACRATGAGTTCCC Parent 1 SNP sequence = TCCATCTGACAATGAGTTCCC Parent 2 SNP sequence = TCCATCTGACGATGAGTTCCC
Probe for Locus	BaAK39M05
Locus	k06517
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0028G04.3 [Oryza sativa (japonica cultivar-group)] dbj BAB93427.1 P0028G04.3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTGACTTGTGGCATAGCTGC Right 5' - TAGCAAGTTTGAGCTCGGTG
Sequence	AV910997
PCR size	353