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GrainGenes Marker Report: k06701

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Locus	k06701
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 106
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK35P01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/C SNP structure (UNICODE) = GTTGATCTTGSACAGCGACTC Parent 1 SNP sequence = GTTGATCTTGGACAGCGACTC Parent 2 SNP sequence = GTTGATCTTGCACAGCGACTC SNP = T/C SNP structure (UNICODE) = GCTAGGTACAYTCGTGACATC Parent 1 SNP sequence = GCTAGGTACATTCGTGACATC Parent 2 SNP sequence = GCTAGGTACACTCGTGACATC
Probe for Locus	BaAK35P01
Locus	k06701
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Low-temperature induced protein lt101.1 (Blt101) (Salt-stress induced hydrophobic peptide ESI3)
Type	PCR
PCR primers	Left 5' - GGCCGATTAAAAGATCGTCA Right 5' - GACCGCAGGAAGCTGTACTC
Sequence	BJ455248
PCR size	393