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GrainGenes Marker Report: k06732

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Locus	k06732
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 147.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK32I05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = XspI SNP = A/G SNP structure (UNICODE) = CCCCAAACTARTAGATGAAAA Parent 1 SNP sequence = CCCCAAACTAATAGATGAAAA Parent 2 SNP sequence = CCCCAAACTAGTAGATGAAAA Recognized sequence for CAPs locus = CTAG
Probe for Locus	BaAK32I05
Locus	k06732
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = chlorophyll a/b binding protein precursor [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - GTGTTCAGCAGCAAAAGCAG Right 5' - GAGTGAAGAAGCCTCACCGT
Sequence	BJ451057
PCR size	410