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GrainGenes Marker Report: k06751

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Locus	k06751
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 173
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK29K23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/C SNP structure (UNICODE) = ACCTCCTTTTSAAATTCATAT Parent 1 SNP sequence = ACCTCCTTTTGAAATTCATAT Parent 2 SNP sequence = ACCTCCTTTTCAAATTCATAT SNP = G/A SNP structure (UNICODE) = GAGCGCTGGTRTTGTAGACGA Parent 1 SNP sequence = GAGCGCTGGTGTTGTAGACGA Parent 2 SNP sequence = GAGCGCTGGTATTGTAGACGA SNP structure (UNICODE) = CATGCACATTRTAGCTACGTA Parent 1 SNP sequence = CATGCACATTGTAGCTACGTA Parent 2 SNP sequence = CATGCACATTATAGCTACGTA
Probe for Locus	BaAK29K23
Locus	k06751
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = photosystem II 10K protein - rice gb AAB46718.1 photosystem II 10 kDa polypeptide [Oryza sativa]
Type	PCR
PCR primers	Left 5' - CGTACAAAGCTCCCTCGAAC Right 5' - ATCCCTGTGCTGTTCTGGAC
Sequence	AV925649
PCR size	398