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GrainGenes Marker Report: k06753

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Locus	k06753
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 162.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK17O14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = CGACTGTTCARTGTTACTAGT Parent 1 SNP sequence = CGACTGTTCAATGTTACTAGT Parent 2 SNP sequence = CGACTGTTCAGTGTTACTAGT SNP = G/A SNP structure (UNICODE) = GATACCTGACRTCAGCCTTGG Parent 1 SNP sequence = GATACCTGACGTCAGCCTTGG Parent 2 SNP sequence = GATACCTGACATCAGCCTTGG
Probe for Locus	BaAK17O14
Locus	k06753
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cinnamyl alcohol dehydrogenase [Lolium perenne]
Type	PCR
PCR primers	Left 5' - GGAACTAGCAGGCAAAATCG Right 5' - GTTTCCTGCAAGAGCAGAGG
Sequence	BJ545538
PCR size	402