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GrainGenes Marker Report: k06765

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Locus	k06765
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 104.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK19A03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = T/A SNP structure (UNICODE) = AGCTTTAGGGWAAATACATAT Parent 1 SNP sequence = AGCTTTAGGGTAAATACATAT Parent 2 SNP sequence = AGCTTTAGGGAAAATACATAT SNP = C/A SNP structure (UNICODE) = ATTTCCCGTGMTGTCTGAAAC Parent 1 SNP sequence = ATTTCCCGTGCTGTCTGAAAC Parent 2 SNP sequence = ATTTCCCGTGATGTCTGAAAC SNP structure (UNICODE) = TAACATACAAMACCAGAGAAA Parent 1 SNP sequence = TAACATACAACACCAGAGAAA Parent 2 SNP sequence = TAACATACAAAACCAGAGAAA
Probe for Locus	BaAK19A03
Locus	k06765
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = holocarboxylase synthetase [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - CGCCTTACAGAACAGCACAA Right 5' - GGAAAGAAGGGCAAAAGGTC
Sequence	BJ448202
PCR size	402