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GrainGenes Marker Report: k06808

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Locus	k06808
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 158.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK18I01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = AAGAAATGATMCCCAAATTGA Parent 1 SNP sequence = AAGAAATGATACCCAAATTGA Parent 2 SNP sequence = AAGAAATGATCCCCAAATTGA SNP = C/G SNP structure (UNICODE) = AATGATTAGGSGGCTATCAGG Parent 1 SNP sequence = AATGATTAGGCGGCTATCAGG Parent 2 SNP sequence = AATGATTAGGGGGCTATCAGG
Probe for Locus	BaAK18I01
Locus	k06808
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = diacylglycerol kinase, putative [Arabidopsis thaliana] gb AAL57635.1 At2g18730/MSF3.11 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TTACATTGCATTCCGATCCA Right 5' - AATCTCAAAGGGTGTGTGCC
Sequence	BJ545572
PCR size	377