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GrainGenes Marker Report: k06971

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Locus	k06971
Type	CAPS
Chromosome	6H
Map	Hv-HNxH602-6H 29.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL4B09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = XbaI SNP = A/C SNP structure (UNICODE) = CAACACCAATMTAGAAATCAG Parent 1 SNP sequence = CAACACCAATATAGAAATCAG Parent 2 SNP sequence = CAACACCAATCTAGAAATCAG Recognized sequence for CAPs locus = TCTAGA
Probe for Locus	BaAL4B09
Locus	k06971
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TCTGTCCACAGCCAAAGATG Right 5' - ACTTTCAATGGCTAATGCGG
Sequence	AV935424
PCR size	401