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GrainGenes Marker Report: k06992

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Locus	k06992
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 325.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL1N23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = MboI SNP = A/G SNP structure (UNICODE) = CGTAGACATGRTCGCCATCGC Parent 1 SNP sequence = CGTAGACATGATCGCCATCGC Parent 2 SNP sequence = CGTAGACATGGTCGCCATCGC Recognized sequence for CAPs locus = GATC
Probe for Locus	BaAL1N23
Locus	k06992
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TTCTGATGAAACCAGTTGCG Right 5' - AAGCCGTTGGGGAGGTTA
Sequence	AV934845
PCR size	391