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GrainGenes Marker Report: k06999

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Locus	k06999
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 68.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL3C05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = TTTTAGGACCRCAACATCTCG Parent 1 SNP sequence = TTTTAGGACCGCAACATCTCG Parent 2 SNP sequence = TTTTAGGACCACAACATCTCG SNP = A/C SNP structure (UNICODE) = GTGACGCTGAMGATTCGCTCT Parent 1 SNP sequence = GTGACGCTGAAGATTCGCTCT Parent 2 SNP sequence = GTGACGCTGACGATTCGCTCT
Probe for Locus	BaAL3C05
Locus	k06999
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] dbj BAA97463.1 unnamed protein product [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GCCTGCATATCAGCACAGAA Right 5' - CCTGATCACCCGTTCTTCAT
Sequence	AV935166
PCR size	382