Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k07037

[Submit comment/correction]

Locus	k07037
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 139.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL36B07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = CAGATGCTGGRTTGTGCCAAC Parent 1 SNP sequence = CAGATGCTGGGTTGTGCCAAC Parent 2 SNP sequence = CAGATGCTGGATTGTGCCAAC SNP = G/T SNP structure (UNICODE) = AGACGACCCAKAAATTAACAA Parent 1 SNP sequence = AGACGACCCAGAAATTAACAA Parent 2 SNP sequence = AGACGACCCATAAATTAACAA
Probe for Locus	BaAL36B07
Locus	k07037
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = serine-tRNA ligase (EC 6.1.1.11) - maize emb CAA07600.1 seryl-tRNA synthetase [Zea mays]
Type	PCR
PCR primers	Left 5' - AGCCTGTAGCAGCATGGATT Right 5' - CACATCGACATGTTCCTTGG
Sequence	BJ476628
PCR size	386