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GrainGenes Marker Report: k07043

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Locus	k07043
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 45.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL6N04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 21 ] SNP = G/A SNP structure (UNICODE) = CCGTTGGAACRCACGGGCTCT Parent 1 SNP sequence = CCGTTGGAACGCACGGGCTCT Parent 2 SNP sequence = CCGTTGGAACACACGGGCTCT SNP = G/T SNP structure (UNICODE) = CTTTGGAGTAKCCAAGCTCTC Parent 1 SNP sequence = CTTTGGAGTAGCCAAGCTCTC Parent 2 SNP sequence = CTTTGGAGTATCCAAGCTCTC SNP = A/G SNP structure (UNICODE) = CCACGGTGGCRAACTTGTCGT Parent 1 SNP sequence = CCACGGTGGCAAACTTGTCGT Parent 2 SNP sequence = CCACGGTGGCGAACTTGTCGT SNP structure (UNICODE) = ACCTCCAGACRGCGGTTGTCT Parent 1 SNP sequence = ACCTCCAGACGGCGGTTGTCT Parent 2 SNP sequence = ACCTCCAGACAGCGGTTGTCT SNP structure (UNICODE) = CCGTGTCCGARGCTCGCCTCA Parent 1 SNP sequence = CCGTGTCCGAAGCTCGCCTCA Parent 2 SNP sequence = CCGTGTCCGAGGCTCGCCTCA SNP structure (UNICODE) = GGCACCCTGCRACTCATCTGT Parent 1 SNP sequence = GGCACCCTGCAACTCATCTGT Parent 2 SNP sequence = GGCACCCTGCGACTCATCTGT
Probe for Locus	BaAL6N04
Locus	k07043
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0073L04.3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGTTTTTCCATGCAGGTTTG Right 5' - ATCTGCCCACTGGAGATCAG
PCR size	403