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GrainGenes Marker Report: k07146

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Locus	k07146
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 205.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL29L09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = CCACTGCCAARTTTCAAGAAG Parent 1 SNP sequence = CCACTGCCAAATTTCAAGAAG Parent 2 SNP sequence = CCACTGCCAAGTTTCAAGAAG SNP = T/C SNP structure (UNICODE) = TAAGAAGACTYCATCCACAGT Parent 1 SNP sequence = TAAGAAGACTTCATCCACAGT Parent 2 SNP sequence = TAAGAAGACTCCATCCACAGT
Probe for Locus	BaAL29L09
Locus	k07146
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = aquaporin PIP1 [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - GACGACAGACAGACACCCCT Right 5' - CACCCTGGCTGACTACAACA
Sequence	BJ548522
PCR size	258