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GrainGenes Marker Report: k07159

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Locus	k07159
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 173.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL40P01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 44 ] SNP = A/T SNP structure (UNICODE) = TTCCGGGCTGWCGTCTGGACG Parent 1 SNP sequence = TTCCGGGCTGACGTCTGGACG Parent 2 SNP sequence = TTCCGGGCTGTCGTCTGGACG SNP = A/G SNP structure (UNICODE) = ATGCCTTGAGRGATATATATA Parent 1 SNP sequence = ATGCCTTGAGAGATATATATA Parent 2 SNP sequence = ATGCCTTGAGGGATATATATA SNP = G/T SNP structure (UNICODE) = ACAGTGAATAKCCCGATCGTG Parent 1 SNP sequence = ACAGTGAATAGCCCGATCGTG Parent 2 SNP sequence = ACAGTGAATATCCCGATCGTG SNP = A/C SNP structure (UNICODE) = ATTAATCAGAMCATCGAGTGG Parent 1 SNP sequence = ATTAATCAGAACATCGAGTGG Parent 2 SNP sequence = ATTAATCAGACCATCGAGTGG SNP = G/A SNP structure (UNICODE) = TAAGCAATCARTGAAATAAAG Parent 1 SNP sequence = TAAGCAATCAGTGAAATAAAG Parent 2 SNP sequence = TAAGCAATCAATGAAATAAAG SNP = C/T SNP structure (UNICODE) = TTTAACCATAYTGATAATTTA Parent 1 SNP sequence = TTTAACCATACTGATAATTTA Parent 2 SNP sequence = TTTAACCATATTGATAATTTA SNP structure (UNICODE) = CACTTGAAATRATTCAATGAT Parent 1 SNP sequence = CACTTGAAATGATTCAATGAT Parent 2 SNP sequence = CACTTGAAATAATTCAATGAT SNP = T/A SNP structure (UNICODE) = ATAAAATAGCWGGTGGTTAAT Parent 1 SNP sequence = ATAAAATAGCTGGTGGTTAAT Parent 2 SNP sequence = ATAAAATAGCAGGTGGTTAAT SNP = C/A SNP structure (UNICODE) = GCTCCTCTCCMAACACGCCAT Parent 1 SNP sequence = GCTCCTCTCCCAACACGCCAT Parent 2 SNP sequence = GCTCCTCTCCAAACACGCCAT SNP structure (UNICODE) = CCATTTCCCAYAGGAATAGAT Parent 1 SNP sequence = CCATTTCCCACAGGAATAGAT Parent 2 SNP sequence = CCATTTCCCATAGGAATAGAT SNP structure (UNICODE) = TGGCCCAGACMATAGCGAGGG Parent 1 SNP sequence = TGGCCCAGACCATAGCGAGGG Parent 2 SNP sequence = TGGCCCAGACAATAGCGAGGG SNP structure (UNICODE) = TCTCACATGGMTGCTGTCTTT Parent 1 SNP sequence = TCTCACATGGATGCTGTCTTT Parent 2 SNP sequence = TCTCACATGGCTGCTGTCTTT
Probe for Locus	BaAL40P01
Locus	k07159
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GTGCATAGTGCTGGTCCTCA Right 5' - CTGACTGCACCACATGCTTT
Sequence	BJ477265
PCR size	351