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GrainGenes Marker Report: k07170

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Locus	k07170
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 105.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL34O13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = AATAAGGGCGRTCGGTTAATT Parent 1 SNP sequence = AATAAGGGCGGTCGGTTAATT Parent 2 SNP sequence = AATAAGGGCGATCGGTTAATT SNP = A/G SNP structure (UNICODE) = TTAGTAAGTCRATGTCTGCTA Parent 1 SNP sequence = TTAGTAAGTCAATGTCTGCTA Parent 2 SNP sequence = TTAGTAAGTCGATGTCTGCTA
Probe for Locus	BaAL34O13
Locus	k07170
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative thioredoxin reductase [Hordeum vulgare subsp. vulgare]
Type	PCR
PCR primers	Left 5' - AGGATAGTCATCGCCGCATA Right 5' - GAAGGTGGCTTCATGACGAT
Sequence	BJ476466
PCR size	350