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GrainGenes Marker Report: k07188

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Locus	k07188
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 24.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL36L08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = ACCTACCACCMATCGCAAAGC Parent 1 SNP sequence = ACCTACCACCAATCGCAAAGC Parent 2 SNP sequence = ACCTACCACCCATCGCAAAGC SNP = C/G SNP structure (UNICODE) = CAGCTCTTCGSCATCAAGCAC Parent 1 SNP sequence = CAGCTCTTCGCCATCAAGCAC Parent 2 SNP sequence = CAGCTCTTCGGCATCAAGCAC
Probe for Locus	BaAL36L08
Locus	k07188
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative soluble acid invertase [Lolium temulentum]
Type	PCR
PCR primers	Left 5' - AGTGGTCGATCAGCGAATCT Right 5' - CATCATCTCCGGCTTAGCTC
Sequence	BJ476723
PCR size	358