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GrainGenes Marker Report: k07240

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Locus	k07240
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 250
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL37N24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/C SNP structure (UNICODE) = CTCCCTCCTCYGTTCCTGATT Parent 1 SNP sequence = CTCCCTCCTCTGTTCCTGATT Parent 2 SNP sequence = CTCCCTCCTCCGTTCCTGATT SNP = G/A SNP structure (UNICODE) = CCATGAGGCCRATGATCCACC Parent 1 SNP sequence = CCATGAGGCCGATGATCCACC Parent 2 SNP sequence = CCATGAGGCCAATGATCCACC SNP = C/T SNP structure (UNICODE) = TTGCCGTGCTYTGTATCGGAC Parent 1 SNP sequence = TTGCCGTGCTCTGTATCGGAC Parent 2 SNP sequence = TTGCCGTGCTTTGTATCGGAC
Probe for Locus	BaAL37N24
Locus	k07240
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = protein kinase family protein [Arabidopsis thaliana] pir A96713 hypothetical protein T6L1.2 [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - TCGTCGCATGGTATCAAAAA Right 5' - CTTCGAAACAGCGAGAGAGC
Sequence	BJ476938
PCR size	326