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GrainGenes Marker Report: k07264

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Locus	k07264
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL40N06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = ATCTCCAAACRAACAGCCTCT Parent 1 SNP sequence = ATCTCCAAACGAACAGCCTCT Parent 2 SNP sequence = ATCTCCAAACAAACAGCCTCT SNP = C/T SNP structure (UNICODE) = ACTTGTTTGAYAGATTAACTA Parent 1 SNP sequence = ACTTGTTTGACAGATTAACTA Parent 2 SNP sequence = ACTTGTTTGATAGATTAACTA
Probe for Locus	BaAL40N06
Locus	k07264
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative coatomer protein complex, subunit beta 2 (beta prime); 18270-12231 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TACATCAGTTTCCCATGCCA Right 5' - AGGAAATCTTGCCCTCCAAT
Sequence	AL501705
PCR size	426