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GrainGenes Marker Report: k07279

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Locus	k07279
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 131.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL18J13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 23 ] SNP = T/C SNP structure (UNICODE) = ACATTGCTTCYTTACCCATGA Parent 1 SNP sequence = ACATTGCTTCTTTACCCATGA Parent 2 SNP sequence = ACATTGCTTCCTTACCCATGA SNP = G/A SNP structure (UNICODE) = ACCTCTCTCARGCCCAAGCTC Parent 1 SNP sequence = ACCTCTCTCAGGCCCAAGCTC Parent 2 SNP sequence = ACCTCTCTCAAGCCCAAGCTC SNP = C/A SNP structure (UNICODE) = TAAGTACTCCMTCCATCCCAA Parent 1 SNP sequence = TAAGTACTCCCTCCATCCCAA Parent 2 SNP sequence = TAAGTACTCCATCCATCCCAA SNP = T/A SNP structure (UNICODE) = TAAAGGGTTAWTTCCATTGAC Parent 1 SNP sequence = TAAAGGGTTATTTCCATTGAC Parent 2 SNP sequence = TAAAGGGTTAATTCCATTGAC SNP structure (UNICODE) = ATGAAGGCCARCAACGGGCAA Parent 1 SNP sequence = ATGAAGGCCAGCAACGGGCAA Parent 2 SNP sequence = ATGAAGGCCAACAACGGGCAA SNP = C/G SNP structure (UNICODE) = TTAAGTGACTSAACTTTGTAC Parent 1 SNP sequence = TTAAGTGACTCAACTTTGTAC Parent 2 SNP sequence = TTAAGTGACTGAACTTTGTAC
Probe for Locus	BaAL18J13
Locus	k07279
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GCTGCTACAGCCGTATGTGA Right 5' - GGACTTCCTCAAGGACATGG
Sequence	BJ474050
PCR size	466