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GrainGenes Marker Report: k07324

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Locus	k07324
Type	CAPS
Chromosome	6H
Map	Hv-HNxH602-6H 112.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL20M22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HaeII SNP = A/G SNP structure (UNICODE) = GCGTCCTTGARCGCCGCTCTC Parent 1 SNP sequence = GCGTCCTTGAACGCCGCTCTC Parent 2 SNP sequence = GCGTCCTTGAGCGCCGCTCTC Recognized sequence for CAPs locus = RGCGCY
Probe for Locus	BaAL20M22
Locus	k07324
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ATTATAGCCATGGCGTCCAC Right 5' - GGTGTATAGCGAGCAGTGGG
PCR size	430