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GrainGenes Marker Report: k07338

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Locus
k07338
Type
SNP
Chromosome
7H
Map
Hv-HNxH602-7H254.2
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
BaAL24B02
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ]
SNP = A/G
SNP structure (UNICODE) = CCTAGAGCATRATATGCGGGT
Parent 1 SNP sequence = CCTAGAGCATAATATGCGGGT
Parent 2 SNP sequence = CCTAGAGCATGATATGCGGGT
SNP structure (UNICODE) = CTCCATGCCTRAACCAGCAAC
Parent 1 SNP sequence = CTCCATGCCTAAACCAGCAAC
Parent 2 SNP sequence = CTCCATGCCTGAACCAGCAAC



Probe for Locus
BaAL24B02
Locus
k07338
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = OSJNBb0015D13.18 [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - AGGTGTCTCGATTCTGCTTCA
Right 5' - ACAAGGCTGGGGGTACATCT
Sequence
BJ475194
PCR size
448