Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k07345

[Submit comment/correction]

Locus	k07345
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 217.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baet39E0309
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/A SNP structure (UNICODE) = TGCTTCAGGCWGATCGGTCGG Parent 1 SNP sequence = TGCTTCAGGCTGATCGGTCGG Parent 2 SNP sequence = TGCTTCAGGCAGATCGGTCGG SNP = G/A SNP structure (UNICODE) = TTCGTTCTCCRACGGCGGATG Parent 1 SNP sequence = TTCGTTCTCCGACGGCGGATG Parent 2 SNP sequence = TTCGTTCTCCAACGGCGGATG
Probe for Locus	baet39E0309
Locus	k07345
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative putative glucosyltransferase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGCACAGCCAAGATCACTTC Right 5' - ATTGTGATCCCAGCGAAAAC
PCR size	262