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GrainGenes Marker Report: k07476

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Locus	k07476
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 92.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baet42A0501
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 19 ] SNP = C/G SNP structure (UNICODE) = AGCTGATCCTSACCTGGCCCT Parent 1 SNP sequence = AGCTGATCCTCACCTGGCCCT Parent 2 SNP sequence = AGCTGATCCTGACCTGGCCCT SNP = A/G SNP structure (UNICODE) = GCCGTTGATCRCCTTGTTAAT Parent 1 SNP sequence = GCCGTTGATCACCTTGTTAAT Parent 2 SNP sequence = GCCGTTGATCGCCTTGTTAAT SNP = G/C SNP structure (UNICODE) = AATTCACCTTSGAGCAGCTGA Parent 1 SNP sequence = AATTCACCTTGGAGCAGCTGA Parent 2 SNP sequence = AATTCACCTTCGAGCAGCTGA SNP = G/A SNP structure (UNICODE) = GGCCCTGCGARCCGGTCAACG Parent 1 SNP sequence = GGCCCTGCGAGCCGGTCAACG Parent 2 SNP sequence = GGCCCTGCGAACCGGTCAACG SNP structure (UNICODE) = CACCATGGCCRAGGCGAAGGC Parent 1 SNP sequence = CACCATGGCCGAGGCGAAGGC Parent 2 SNP sequence = CACCATGGCCAAGGCGAAGGC
Probe for Locus	baet42A0501
Locus	k07476
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = peroxidase
Type	PCR
PCR primers	Left 5' - GCCTTTCATCTTAAAGCCCA Right 5' - CTGATGTGTCATACGAGCCG
PCR size	258