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GrainGenes Marker Report: k07699

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Locus	k07699
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 289.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS29D05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = C/A SNP structure (UNICODE) = GAAGATAACAMCATCTTAGAA Parent 1 SNP sequence = GAAGATAACACCATCTTAGAA Parent 2 SNP sequence = GAAGATAACAACATCTTAGAA SNP structure (UNICODE) = TTAGAAAACGMTGTGACGTCA Parent 1 SNP sequence = TTAGAAAACGCTGTGACGTCA Parent 2 SNP sequence = TTAGAAAACGATGTGACGTCA SNP = C/T SNP structure (UNICODE) = GTGACGTCATYTAGGGTCAGT Parent 1 SNP sequence = GTGACGTCATCTAGGGTCAGT Parent 2 SNP sequence = GTGACGTCATTTAGGGTCAGT
Probe for Locus	BaGS29D05
Locus	k07699
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative mitochondrial processing peptidase alpha subunit, mitochondrial precursor (Alpha-MPP) [Oryza sativa
Type	PCR
PCR primers	Left 5' - AAAAGCCAGACGCAGAAAAA Right 5' - ACCATACACCTTCGCCACTC
Sequence	BJ467644
PCR size	363