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GrainGenes Marker Report: k07738

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Locus	k07738
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 163.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS37A16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/G SNP structure (UNICODE) = TTCCTGGCCGSCGGCGCCCTC Parent 1 SNP sequence = TTCCTGGCCGCCGGCGCCCTC Parent 2 SNP sequence = TTCCTGGCCGGCGGCGCCCTC SNP = G/C SNP structure (UNICODE) = TGGCGATGCCSCTGCCGCGCT Parent 1 SNP sequence = TGGCGATGCCGCTGCCGCGCT Parent 2 SNP sequence = TGGCGATGCCCCTGCCGCGCT
Probe for Locus	BaGS37A16
Locus	k07738
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Calmodulin-related protein gb AAA33705.1 calmodulin-related protein
Type	PCR
PCR primers	Left 5' - CATACCAGATTCTGCAGTCCAA Right 5' - GCCGCAAACTCAAAATATGC
Sequence	BJ473223
PCR size	352