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GrainGenes Marker Report: k07757

Locus	k07757
Type	CAPS
Chromosome	5H
Map	Hv-HNxH602-5H 79.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS38M11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HapII SNP = T/C SNP structure (UNICODE) = CAAAGACATCYGGACGAACCA Parent 1 SNP sequence = CAAAGACATCTGGACGAACCA Parent 2 SNP sequence = CAAAGACATCCGGACGAACCA Recognized sequence for CAPs locus = CCGG
Probe for Locus	BaGS38M11
Locus	k07757
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GACAACATCACCGACGAATG Right 5' - CATGCAGAGCCAGCAGAGTA
Sequence	CA005686
PCR size	350