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GrainGenes Marker Report: k07774

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Locus	k07774
Type	CAPS
Chromosome	2H
Map	Hv-HNxH602-2H 64.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS37N19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = MflI SNP = G/C SNP structure (UNICODE) = ACAGCAGGATSCACAATGGAA Parent 1 SNP sequence = ACAGCAGGATGCACAATGGAA Parent 2 SNP sequence = ACAGCAGGATCCACAATGGAA Recognized sequence for CAPs locus = RGATCY
Probe for Locus	BaGS37N19
Locus	k07774
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ribosomal protein s6 RPS6-2 [Zea mays]
Type	PCR
PCR primers	Left 5' - GTGGAGTGGATCCGACAAGT Right 5' - TTTGTTGAGCCTGTCTGGTG
Sequence	BJ550143
PCR size	352