Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k07797

[Submit comment/correction]

Locus	k07797
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 186.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS24O11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = A/C SNP structure (UNICODE) = GAAAGTATGCMACAGGAGGAT Parent 1 SNP sequence = GAAAGTATGCAACAGGAGGAT Parent 2 SNP sequence = GAAAGTATGCCACAGGAGGAT SNP = C/T SNP structure (UNICODE) = TGCCAGCTAAYAAAAATAACT Parent 1 SNP sequence = TGCCAGCTAACAAAAATAACT Parent 2 SNP sequence = TGCCAGCTAATAAAAATAACT SNP = T/C SNP structure (UNICODE) = AGGCAGAAAAYGTGAATTGTA Parent 1 SNP sequence = AGGCAGAAAATGTGAATTGTA Parent 2 SNP sequence = AGGCAGAAAACGTGAATTGTA
Probe for Locus	BaGS24O11
Locus	k07797
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ADENYLATE KINASE A (ATP-AMP TRANSPHOSPHORYLASE) dbj BAA01180.1 adenylate kinase-a [Oryza sativa]
Type	PCR
PCR primers	Left 5' - TCATGCGGAACAAGAGTTTG Right 5' - TGATCCCACCAAGTCATTCA
Sequence	BQ659710
PCR size	352