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GrainGenes Marker Report: k07803

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Locus	k07803
Type	CAPS
Chromosome	6H
Map	Hv-HNxH602-6H 167.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS18P04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = AfaI SNP = A/G SNP structure (UNICODE) = ATTCACTGGTRCAGACGATGA Parent 1 SNP sequence = ATTCACTGGTACAGACGATGA Parent 2 SNP sequence = ATTCACTGGTGCAGACGATGA Recognized sequence for CAPs locus = GTAC
Probe for Locus	BaGS18P04
Locus	k07803
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = leucyl aminopeptidase (EC 3.4.11.1) - parsley (fragment) emb CAA68143.1 cytosol aminopeptidase; leucine aminopeptidase [Petroselinum
Type	PCR
PCR primers	Left 5' - AAACGGGAAATGTTTTGCAG Right 5' - TCAAGAAGGCCATCGAGAAG
Sequence	CA016018
PCR size	350