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GrainGenes Marker Report: k07833

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Locus	k07833
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 139.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS34I17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/A SNP structure (UNICODE) = ACCACAAAAAWTCTGGCTTTC Parent 1 SNP sequence = ACCACAAAAATTCTGGCTTTC Parent 2 SNP sequence = ACCACAAAAAATCTGGCTTTC SNP = C/T SNP structure (UNICODE) = ATCCATGATCYGTGTTGCCTG Parent 1 SNP sequence = ATCCATGATCCGTGTTGCCTG Parent 2 SNP sequence = ATCCATGATCTGTGTTGCCTG
Probe for Locus	BaGS34I17
Locus	k07833
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0086B14.26 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGGTACAATGTCGTAGCGGA Right 5' - ATCGGTTGAGCTCCACACTC
Sequence	AL499858
PCR size	384