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GrainGenes Marker Report: k07840

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Locus	k07840
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS39K23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/G SNP structure (UNICODE) = ATCTGCGCGCSCGGCCTTTTG Parent 1 SNP sequence = ATCTGCGCGCCCGGCCTTTTG Parent 2 SNP sequence = ATCTGCGCGCGCGGCCTTTTG SNP = A/G SNP structure (UNICODE) = AAGAACTGACRGAGGACACGA Parent 1 SNP sequence = AAGAACTGACAGAGGACACGA Parent 2 SNP sequence = AAGAACTGACGGAGGACACGA
Probe for Locus	BaGS39K23
Locus	k07840
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = phosphoenolpyruvate carboxylase kinase [Sorghum bicolor]
Type	PCR
PCR primers	Left 5' - AACAACAACTGAGGGGCCTA Right 5' - TGCAGAGAAGACTGGCTGAA
Sequence	BU977256
PCR size	379