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GrainGenes Marker Report: k07877

Locus	k07877
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 266.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS19C07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 23 ] SNP = C/T SNP structure (UNICODE) = CCGCGCCTCTYGGGTCACCGG Parent 1 SNP sequence = CCGCGCCTCTCGGGTCACCGG Parent 2 SNP sequence = CCGCGCCTCTTGGGTCACCGG SNP structure (UNICODE) = TGAAAAATGTYATATCATTCA Parent 1 SNP sequence = TGAAAAATGTCATATCATTCA Parent 2 SNP sequence = TGAAAAATGTTATATCATTCA SNP = G/A SNP structure (UNICODE) = GACAGGATGARCAACTTGCCT Parent 1 SNP sequence = GACAGGATGAGCAACTTGCCT Parent 2 SNP sequence = GACAGGATGAACAACTTGCCT SNP = A/G SNP structure (UNICODE) = CTCGATTGCCRATGTATATGA Parent 1 SNP sequence = CTCGATTGCCAATGTATATGA Parent 2 SNP sequence = CTCGATTGCCGATGTATATGA SNP = C/A SNP structure (UNICODE) = CTTTCCTGATMATGGAGCAAT Parent 1 SNP sequence = CTTTCCTGATCATGGAGCAAT Parent 2 SNP sequence = CTTTCCTGATAATGGAGCAAT SNP = A/C SNP structure (UNICODE) = CTGGTATTGGMGGCAATGGGA Parent 1 SNP sequence = CTGGTATTGGAGGCAATGGGA Parent 2 SNP sequence = CTGGTATTGGCGGCAATGGGA
Probe for Locus	BaGS19C07
Locus	k07877
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative aldehyde dehydrogenase BIS1 [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - ACACGGTCCATGGAAGAAAC Right 5' - CATAGATGGGCCCTTGAAGA
Sequence	BQ661451
PCR size	381