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GrainGenes Marker Report: k07942

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Locus
k07942
Type
SNP
Chromosome
6H
Map
Hv-HNxH602-6H31.9
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
BaGS26P07
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ]
SNP = G/C
SNP structure (UNICODE) = TCTCCCGGGASGTGATGGTGG
Parent 1 SNP sequence = TCTCCCGGGAGGTGATGGTGG
Parent 2 SNP sequence = TCTCCCGGGACGTGATGGTGG
SNP structure (UNICODE) = CGTGCTTGGCSAGCTCGCCGG
Parent 1 SNP sequence = CGTGCTTGGCGAGCTCGCCGG
Parent 2 SNP sequence = CGTGCTTGGCCAGCTCGCCGG



Probe for Locus
BaGS26P07
Locus
k07942
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = Histone H2B.2 pir HSWT2B histone H2B.2 - wheat
Type
PCR
PCR primers
Left 5' - AATGCGACACCGTGATGATA
Right 5' - TCAAGGCAGGAATACCGAAG
Sequence
AV918558
PCR size
265