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GrainGenes Marker Report: k07951

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Locus	k07951
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 109.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS22B13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = C/T SNP structure (UNICODE) = GTTCCTGCTTYTGACGAAGAG Parent 1 SNP sequence = GTTCCTGCTTCTGACGAAGAG Parent 2 SNP sequence = GTTCCTGCTTTTGACGAAGAG SNP structure (UNICODE) = AACCCATATCYCACACACACC Parent 1 SNP sequence = AACCCATATCCCACACACACC Parent 2 SNP sequence = AACCCATATCTCACACACACC SNP = T/C SNP structure (UNICODE) = TAGGAGTAATYCACAACCCAT Parent 1 SNP sequence = TAGGAGTAATTCACAACCCAT Parent 2 SNP sequence = TAGGAGTAATCCACAACCCAT
Probe for Locus	BaGS22B13
Locus	k07951
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative cell cycle regulatory protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCTTGAACGCCTGAAGCATA Right 5' - TGCCGAAACCTATAACTGCC
Sequence	AV918744
PCR size	258