Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k07995

[Submit comment/correction]

Locus	k07995
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 99.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS17N04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/T SNP structure (UNICODE) = TTCTTAAGAAKGTAGTCGGTG Parent 1 SNP sequence = TTCTTAAGAAGGTAGTCGGTG Parent 2 SNP sequence = TTCTTAAGAATGTAGTCGGTG SNP = G/A SNP structure (UNICODE) = CTCTACCAATRCCTAGGGGCC Parent 1 SNP sequence = CTCTACCAATGCCTAGGGGCC Parent 2 SNP sequence = CTCTACCAATACCTAGGGGCC SNP = T/C SNP structure (UNICODE) = GACATTCCGAYGGAACTAGCC Parent 1 SNP sequence = GACATTCCGATGGAACTAGCC Parent 2 SNP sequence = GACATTCCGACGGAACTAGCC
Probe for Locus	BaGS17N04
Locus	k07995
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ESTs C22458(C62866),C22459(C62866) correspond to a region of the predicted gene.~Similar to genomic sequence of
Type	PCR
PCR primers	Left 5' - GCAGAGCATCCAGAACATCA Right 5' - CACCATTGACCATTGCGTAG
Sequence	AV918103
PCR size	251