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GrainGenes Marker Report: k08026

Locus	k08026
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 135.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS26D18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 14 ] SNP = T/C SNP structure (UNICODE) = TCGTCAATTGYTTTCAGACAG Parent 1 SNP sequence = TCGTCAATTGTTTTCAGACAG Parent 2 SNP sequence = TCGTCAATTGCTTTCAGACAG SNP = A/G SNP structure (UNICODE) = TGCTGAAATCRTGCATTCCCC Parent 1 SNP sequence = TGCTGAAATCATGCATTCCCC Parent 2 SNP sequence = TGCTGAAATCGTGCATTCCCC SNP structure (UNICODE) = CAGCGCCGCGRTGTTCACTCG Parent 1 SNP sequence = CAGCGCCGCGATGTTCACTCG Parent 2 SNP sequence = CAGCGCCGCGGTGTTCACTCG SNP structure (UNICODE) = CAGACAGAGAYCGCAGAATGA Parent 1 SNP sequence = CAGACAGAGATCGCAGAATGA Parent 2 SNP sequence = CAGACAGAGACCGCAGAATGA
Probe for Locus	BaGS26D18
Locus	k08026
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = F14J16.13 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GGTCGACATCTTCCCAAAAA Right 5' - GACAAGAAAGACGGGGACAA
Sequence	BJ467238
PCR size	309