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GrainGenes Marker Report: k08084

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Locus	k08084
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 162.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS9L23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/T SNP structure (UNICODE) = CAAATATACTKATACACATAG Parent 1 SNP sequence = CAAATATACTGATACACATAG Parent 2 SNP sequence = CAAATATACTTATACACATAG SNP = A/G SNP structure (UNICODE) = ATAGTCAAGARAAACTTTCAT Parent 1 SNP sequence = ATAGTCAAGAAAAACTTTCAT Parent 2 SNP sequence = ATAGTCAAGAGAAACTTTCAT SNP = C/A SNP structure (UNICODE) = CAGAATAACAMATTAGTGAAA Parent 1 SNP sequence = CAGAATAACACATTAGTGAAA Parent 2 SNP sequence = CAGAATAACAAATTAGTGAAA
Probe for Locus	BaGS9L23
Locus	k08084
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative protein [Arabidopsis thaliana] gb AAM10228.1 putative protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GACGTCAGCAATGCTCTCTG Right 5' - ATGAAGCCAAGCTTGAGAGG
Sequence	AV920207
PCR size	299