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GrainGenes Marker Report: k08224

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Locus	k08224
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 58.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS18J21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = CCTTGTGACCKTCATACATCG Parent 1 SNP sequence = CCTTGTGACCGTCATACATCG Parent 2 SNP sequence = CCTTGTGACCTTCATACATCG SNP = A/G SNP structure (UNICODE) = AGGTCACAATRGGTTGATCAA Parent 1 SNP sequence = AGGTCACAATAGGTTGATCAA Parent 2 SNP sequence = AGGTCACAATGGGTTGATCAA
Probe for Locus	BaGS18J21
Locus	k08224
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = thiosulfate sulfurtransferase [Datisca glomerata]
Type	PCR
PCR primers	Left 5' - GGGTGGTGGTGACTCCATAG Right 5' - TCCTGGAGTTCCTGGCATAC
Sequence	AV922541
PCR size	408