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GrainGenes Marker Report: k08284

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Locus	k08284
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 180.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS31P01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 15 ] SNP = G/T SNP structure (UNICODE) = AGCCTCCGAAKCCGTAGAGGG Parent 1 SNP sequence = AGCCTCCGAAGCCGTAGAGGG Parent 2 SNP sequence = AGCCTCCGAATCCGTAGAGGG SNP = C/G SNP structure (UNICODE) = TGAGCACGCCSCGGGTCTCCT Parent 1 SNP sequence = TGAGCACGCCCCGGGTCTCCT Parent 2 SNP sequence = TGAGCACGCCGCGGGTCTCCT SNP structure (UNICODE) = CGTCCATGGCKGTGACGGTCT Parent 1 SNP sequence = CGTCCATGGCGGTGACGGTCT Parent 2 SNP sequence = CGTCCATGGCTGTGACGGTCT SNP = G/A SNP structure (UNICODE) = GGCGCTTGGCRCCGCCCTTGC Parent 1 SNP sequence = GGCGCTTGGCGCCGCCCTTGC Parent 2 SNP sequence = GGCGCTTGGCACCGCCCTTGC
Probe for Locus	BaGS31P01
Locus	k08284
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = histone H4 (TH091) - wheat gb AAA34292.1 histone H4
Type	PCR
PCR primers	Left 5' - GACAGCATCAGGTTGGTTGA Right 5' - TCAGCCAGAAGTACGGGAAC
Sequence	BJ466398
PCR size	409