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GrainGenes Marker Report: k08304

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Locus	k08304
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 203.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS28O21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = A/G SNP structure (UNICODE) = TCCTCTTCGARCTGTAGGGGA Parent 1 SNP sequence = TCCTCTTCGAACTGTAGGGGA Parent 2 SNP sequence = TCCTCTTCGAGCTGTAGGGGA SNP = C/G SNP structure (UNICODE) = CGCCCTTGCCSAGACCCTTGC Parent 1 SNP sequence = CGCCCTTGCCCAGACCCTTGC Parent 2 SNP sequence = CGCCCTTGCCGAGACCCTTGC SNP structure (UNICODE) = AGATCTTGAGSACGCCGCGGG Parent 1 SNP sequence = AGATCTTGAGCACGCCGCGGG Parent 2 SNP sequence = AGATCTTGAGGACGCCGCGGG
Probe for Locus	BaGS28O21
Locus	k08304
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = histone H4 (TH091) - wheat gb AAA34292.1 histone H4
Type	PCR
PCR primers	Left 5' - GGAGCTCTGGTAGCAGCAAT Right 5' - CCTCAGGTACAATGATGGGG
Sequence	BM375750
PCR size	427