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GrainGenes Marker Report: k08640

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Locus	k08640
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 299.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH54D08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/A SNP structure (UNICODE) = GTACAGTGCTMAACGGTGTGC Parent 1 SNP sequence = GTACAGTGCTCAACGGTGTGC Parent 2 SNP sequence = GTACAGTGCTAAACGGTGTGC SNP = A/C SNP structure (UNICODE) = CCACGTTCAGMTTCACCAAGG Parent 1 SNP sequence = CCACGTTCAGATTCACCAAGG Parent 2 SNP sequence = CCACGTTCAGCTTCACCAAGG
Probe for Locus	BaH54D08
Locus	k08640
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0004A17.3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAGAGTAGGGCGAGAGAGGC Right 5' - AGGAATGTACGACCTCACGG
Sequence	AV920794
PCR size	353