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GrainGenes Marker Report: k08689

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Locus	k08689
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 18.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH28L07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = MvaI SNP = C/G SNP structure (UNICODE) = CCATGCTTCCSAGGACAGAGC Parent 1 SNP sequence = CCATGCTTCCCAGGACAGAGC Parent 2 SNP sequence = CCATGCTTCCGAGGACAGAGC Recognized sequence for CAPs locus = CCWGG
Probe for Locus	BaH28L07
Locus	k08689
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GTACAGCAGTGCACAAGGGA Right 5' - AGCACTTCCTGGCACCATAC
PCR size	278