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GrainGenes Marker Report: k08749

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Locus	k08749
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 149.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH23J15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = SacII SNP = G/C SNP structure (UNICODE) = TTCAAACATCSGCGGAAGATT Parent 1 SNP sequence = TTCAAACATCGGCGGAAGATT Parent 2 SNP sequence = TTCAAACATCCGCGGAAGATT Recognized sequence for CAPs locus = CCGCGG
Probe for Locus	BaH23J15
Locus	k08749
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = protein kinase family protein [Arabidopsis thaliana] gb AAO22581.1 putative protein kinase [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GTTCAATCGCACAAACCAAA Right 5' - CGAAGAAAGGGCAGTCAAAG
Sequence	AV835877
PCR size	279