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GrainGenes Marker Report: k08783

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Locus	k08783
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 110
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH30B03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = A/C SNP structure (UNICODE) = TCAAGCCTGAMAATACGACAA Parent 1 SNP sequence = TCAAGCCTGAAAATACGACAA Parent 2 SNP sequence = TCAAGCCTGACAATACGACAA SNP = T/C SNP structure (UNICODE) = TTCACATGTTYGCTTTCCTCT Parent 1 SNP sequence = TTCACATGTTTGCTTTCCTCT Parent 2 SNP sequence = TTCACATGTTCGCTTTCCTCT SNP = T/A SNP structure (UNICODE) = GGCCATAAGAWATTTCACACC Parent 1 SNP sequence = GGCCATAAGATATTTCACACC Parent 2 SNP sequence = GGCCATAAGAAATTTCACACC
Probe for Locus	BaH30B03
Locus	k08783
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0519D04.36 [Oryza sativa (japonica cultivar-group)] dbj BAB85377.1 P0519D04.36 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GAATTCGACGCTGTTTTTCC Right 5' - AAGGAGCTTGACATCGCAGT
Sequence	AV946113
PCR size	345