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GrainGenes Marker Report: k08881

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Locus	k08881
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 198.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH37P24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/C SNP structure (UNICODE) = GCATTGGTAGYCAAATGTCAT Parent 1 SNP sequence = GCATTGGTAGTCAAATGTCAT Parent 2 SNP sequence = GCATTGGTAGCCAAATGTCAT SNP = C/A SNP structure (UNICODE) = AGCAGAGCAGMTTACGGAAGA Parent 1 SNP sequence = AGCAGAGCAGCTTACGGAAGA Parent 2 SNP sequence = AGCAGAGCAGATTACGGAAGA
Probe for Locus	BaH37P24
Locus	k08881
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative disease resistance protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACCAGACAACCTCCAAGCAA Right 5' - TAAGGGCCCAAAACAACAAG
Sequence	AV947142
PCR size	371