GrainGenes Marker Report: k08908
Locus
k08908
Type
CAPS
Chromosome
4H
Map
Hv-HNxH602-4H 96.3
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
BaH50G09
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = TaqI SNP = C/T SNP structure (UNICODE) = GCCGCCCGCCYCGATTTGTTT Parent 1 SNP sequence = GCCGCCCGCCCCGATTTGTTT Parent 2 SNP sequence = GCCGCCCGCCTCGATTTGTTT Recognized sequence for CAPs locus = TCGA
Probe for Locus
BaH50G09
Locus
k08908
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = vacuolar targeting receptor bp-80 [Triticum aestivum]
Type
PCR
PCR primers
Left 5' - GACGAGAGGGCTCCACTTTA
Right 5' - CATAGGCGCTGTATCTCCGT
Sequence
AV941306
PCR size
374
GrainGenes Marker Report: k08908
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
| |||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
|